BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025H06SP1|AL428457
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1055 1746 0.0
>3x_Contig1055
Length = 3919
Score = 1746 bits (881), Expect = 0.0
Identities = 881/881 (100%)
Strand = Plus / Plus
Query: 1 tcgatgattgtagcatcaattaagattattccgatgatttctggtttagttctcgctaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2708 tcgatgattgtagcatcaattaagattattccgatgatttctggtttagttctcgctaac 2767
Query: 61 gggaccgtcgcatataagcaggatcttttcaaacctaaaaatgcactagttgttggcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2768 gggaccgtcgcatataagcaggatcttttcaaacctaaaaatgcactagttgttggcagt 2827
Query: 121 tttatctccatacttggaggtgctttctttgtgcccataaaatacgttgacgacaacctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2828 tttatctccatacttggaggtgctttctttgtgcccataaaatacgttgacgacaacctc 2887
Query: 181 ttttggaaattattttttatgggaggtttctttacaggtttgggtggtgcgttcttcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2888 ttttggaaattattttttatgggaggtttctttacaggtttgggtggtgcgttcttcttc 2947
Query: 241 tgttatatgattacaatggccattggtgatgctccggaccaatacaaggcgcttgctgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2948 tgttatatgattacaatggccattggtgatgctccggaccaatacaaggcgcttgctgga 3007
Query: 301 ggtatcgttcaaacttcaggacaattcggtaacgaagtttctctatccattgttatatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3008 ggtatcgttcaaacttcaggacaattcggtaacgaagtttctctatccattgttatatct 3067
Query: 361 ttattgggtaaccaaactaccgacaaagccgatctcagagacagatttcaaaatgcttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3068 ttattgggtaaccaaactaccgacaaagccgatctcagagacagatttcaaaatgcttcc 3127
Query: 421 tacattgtcattacagctgctaccatatccactttggtctctctatttttagtcaaaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3128 tacattgtcattacagctgctaccatatccactttggtctctctatttttagtcaaaggg 3187
Query: 481 ccacttgaaagctctggtgatgaggaaaaacaactgtcagaatgctccgaaagcactaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3188 ccacttgaaagctctggtgatgaggaaaaacaactgtcagaatgctccgaaagcactaca 3247
Query: 541 agttccaattctaacccagaaaatcaaatcgaaacggtcatggttatatgtcccgatact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3248 agttccaattctaacccagaaaatcaaatcgaaacggtcatggttatatgtcccgatact 3307
Query: 601 cgtgacaagaaggaggaaactgttgaccagtatttagcttaatttaaccagtgcgtattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3308 cgtgacaagaaggaggaaactgttgaccagtatttagcttaatttaaccagtgcgtattt 3367
Query: 661 gaacatgttttctaaacgtcaaatatgattatataacctaattcataatgaaccacatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3368 gaacatgttttctaaacgtcaaatatgattatataacctaattcataatgaaccacatat 3427
Query: 721 aaagagcaccctcatgtagactgcaaagataatgttgaaaatagtgctaatggcaactca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3428 aaagagcaccctcatgtagactgcaaagataatgttgaaaatagtgctaatggcaactca 3487
Query: 781 ctgttctatctgaagcatcgagctgagatatctgacccatatgtacttccatctttatag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3488 ctgttctatctgaagcatcgagctgagatatctgacccatatgtacttccatctttatag 3547
Query: 841 tttcctcattcattccttttatccttaatcttcaatgtagt 881
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 3548 tttcctcattcattccttttatccttaatcttcaatgtagt 3588
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6817
Number of Sequences: 1807
Number of extensions: 6817
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)